GenomQC
In-browser RNA-seq QC

Make QC decisions
clear and reviewable.

Open a MultiQC export. Get a sample-level decision, the evidence behind it and the next action.

No raw-data upload No installation Immediate result
Validate a report with us →

Data input

Analyze your MultiQC export

LOCAL

Analysis happens entirely in this browser tab.

Supported formatsUp to 500 samples · No silent truncation

Decision report

Run decision summary

ILLUSTRATIVE DATASET

Source: GenomQC demo cohort

Generated in this browser

Overall status WARN

Review gate

Hold before downstream analysis

One or more samples cross a FAIL boundary and require qualified review.

100% metric coverage 1 sample in review queue
Evidence coverage

PASS applies only to the available metrics at the active thresholds. It is not biological validation.

Key findings

    Recommended actions

      Sample Decision Reads Q30 GC Dup. Adapter Evidence Primary reason

      Decision trace

      Samples requiring attention

      Every flag stays connected to its observed value, decision and recommended next action.

      Decision policy · Default RNA-seq profile

      Visible rules. No black box.

      These screening thresholds are transparent starting points. Validate them against the assay, organism, library preparation, platform and laboratory SOP.

      How it works

      A defensible decision,
      not another wall of plots.

      Common QC signals, one visible decision layer.

      01

      Import

      Read supported MultiQC summaries.

      02

      Evaluate

      Evaluate the signals that need attention.

      03

      Decide

      Keep the status, evidence and next action together.

      Independent validation

      Validate one
      real report with us.

      Share metadata first. We compare metric recognition and return a concise QC-triage note.

      01DescribeVersion, export type, sample count.
      02ValidateMetric recognition and review queue.
      03ReceiveA concise compatibility note.
      Request a validation check

      Start with metadata only. Participation does not require a purchase or permission to publish your results. Do not email raw reads, patient information, credentials or confidential research content.

      Access

      Start with the free report.
      Upgrade when your lab needs more.

      Free browser report; configurable offline workspace when you need it.

      Public beta

      $0

      • Local analysis in your browser
      • PASS / WARN / FAIL summary
      • JSON and printable report
      Try it now
      Founder lab license

      Pro · Founder lab license

      $19 USD · one-time / up to 5 users

      • Custom thresholds and reusable profiles
      • Lab-branded PDF, JSON and CSV output
      • English / Turkish reports and v1.x updates
      Buy Pro View full product details → Secure Lemon Squeezy checkout with automatic ZIP delivery after payment. One-time $19 USD.

      LAB SETUP · DONE WITH YOU

      $49 USD · one-time technical setup

      • GenomQC Pro Founder Lab License included
      • One custom profile built from your documented SOP
      • Lab identity, export check and 7-day setup support
      Request lab setup Technical configuration only. Your qualified team supplies and approves the scientific thresholds.
      For research use.

      This tool is not designed for clinical diagnosis, treatment or patient management. Every result requires appropriately qualified review.